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Bayesian approach to disease model calibration

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dc.contributor.advisor Walsh, Cathal Dominic
dc.contributor.author Semochkina, Daria A.
dc.date.accessioned 2018-08-14T13:39:33Z
dc.date.available 2018-08-14T13:39:33Z
dc.date.issued 2018
dc.identifier.uri http://hdl.handle.net/10344/7062
dc.description peer-reviewed en_US
dc.description.abstract This thesis is concerned with the calibration of disease models in order to inform decisions about public health problems. These models are used to make predictions about the likely outcomes of disease spread (e.g. morbidity and mortality) in a population, given different interventions (e.g. vaccination, screening and treatment). These models necessitate simpli cations of the underlying mechanisms of disease progression, but have become essential tools in areas such as cost-effectiveness research. Although there are many types of models that can be used, all of them involve parameters, which affect the model's outputs, for example, the age of onset of illness, duration of particular health states or disease specifc mortality. Identifying areas of the model's parameter space that are consistent with data is referred to as model calibration. One of the areas of concern when searching a model's parameter space to get a prediction from the model (that best agrees with observed data) is the propagation of uncertainty. If one has a prediction about an outcome, the question of how uncertain we are about this prediction should be raised. In model calibration, the uncertainty we are interested in is uncertainty in parameters[5]. There are many approaches to model calibration with little consensus on the best practice. Additionally, within the current approaches, some signifi cant problems, that one could face when attempting calibration, merit further examination. We highlight this with a literature search. We believe, that many popular approaches have not yet addressed fundamental issues and more research may be needed to tackle these issues. The model calibrations in this thesis are carried out in a Bayesian framework, using Markov chain Monte Carlo (MCMC) techniques. Although the ultimate goal of calibration should be predictions about some quantities of interest, the emphasis of this work is on the techniques and methodology of model calibration in general. Many possible difficulties of using MCMC and some other sampling approaches are presented and discussed. Avenues for additional research are identified. en_US
dc.language.iso eng en_US
dc.publisher University of Limerick en_US
dc.subject public health problems en_US
dc.subject disease models en_US
dc.subject Bayesian approach en_US
dc.subject calibration en_US
dc.title Bayesian approach to disease model calibration en_US
dc.type info:eu-repo/semantics/doctoralThesis en_US
dc.type.supercollection all_ul_research en_US
dc.type.supercollection ul_published_reviewed en_US
dc.type.supercollection ul_theses_dissertations en_US
dc.contributor.sponsor SFI en_US
dc.relation.projectid 12/IA/1683 en_US
dc.rights.accessrights info:eu-repo/semantics/openAccess en_US


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